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University

Shawnee State University

Major

Biology - Biomedical Sciences

Student Type

Undergraduate Student

Presentation Types

Oral Group Presentation

Keywords:

chick limb, CRISPR, transformation, embryos

Abstract

CRISPR-Cas9 is used to investigate gene(s) underlying the limbless (ll) chick

mutant phenotype. The ll mutation has been mapped to an ~2.6 Mb region of chromosome 2. Genes in the targeted region suspected to have a role in limb development include: SP8, Twist1, and NUPL2. Target sequences for guide RNAs (gRNAs) were identified using an online tool and synthesized commercially. Double stranded oligos were ligated into the U6.3>gRNA.f+e plasmid. The newly ligated plasmid was transformed into competent cells, plated onto LB-ampicillin plates, and expanded in liquid culture. A mini prep was performed to isolate plasmid DNA to allow the gRNA production in cells of the chick embryo. Future plans include co-electroporating the oligo containing U6.3>gRNA.f+e plasmid with pCAGG>nls-hCas9-nls-GFP plasmid into HH14 chick forelimb fields. Embryos will be incubated for 24-48 hours to examine limb development compared to the controls.

Human Subjects

no

IRB Approval

no

Faculty Mentor Name

Kimberly Inman

Faculty Mentor Title

Dean of Arts and Sciences

Faculty Mentor Academic Department

Natural Sciences

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Using CRISPR-Cas9 Techniques to Investigate Chick Limb Development

CRISPR-Cas9 is used to investigate gene(s) underlying the limbless (ll) chick

mutant phenotype. The ll mutation has been mapped to an ~2.6 Mb region of chromosome 2. Genes in the targeted region suspected to have a role in limb development include: SP8, Twist1, and NUPL2. Target sequences for guide RNAs (gRNAs) were identified using an online tool and synthesized commercially. Double stranded oligos were ligated into the U6.3>gRNA.f+e plasmid. The newly ligated plasmid was transformed into competent cells, plated onto LB-ampicillin plates, and expanded in liquid culture. A mini prep was performed to isolate plasmid DNA to allow the gRNA production in cells of the chick embryo. Future plans include co-electroporating the oligo containing U6.3>gRNA.f+e plasmid with pCAGG>nls-hCas9-nls-GFP plasmid into HH14 chick forelimb fields. Embryos will be incubated for 24-48 hours to examine limb development compared to the controls.